OpenAtlas

After Debian, the standard installation system for OpenAtlas, released the new version 12 bookworm we will look into, test and adapt OpenAtlas to the new available software packages.

• Python from 3.9 to 3.11.2 (changelog 3.10, 3.11)
• Flask from 1.1.2 to 2.2.2 (changelog 2.0.0)
• PostgreSQL from 13.11 to 15 (changelog: 14.0, 15)
• PostGIS from 3.1 to 3.3
• Jinja2 from 2.11 to 3.1 (changelog)
• Node.js from 12.22.12 to 18.13.0

Notes
Removable packages: python3-rdflib-jsonld (python3-rdflib 6.1.1 should include this package)
New packages: python3-email-validator, and if developing with Mypy: python3-typeshed
Make sure to backup databases and other data information before.
This link might be useful when upgrading: howto upgrade to bookworm, in short:

sudo apt update
sudo apt upgrade
sudo vim /etc/apt/sources.list (replace bullseye with bookworm, add non-free-firmware, see example below)
sudo apt update
sudo apt upgrade

sudo apt full-upgrade
sudo apt autoremove
sudo reboot

/etc/apt/sources.list example

deb http://deb.debian.org/debian bookworm main contrib
deb http://deb.debian.org/debian bookworm-updates main contrib
deb http://deb.debian.org/debian-security/ bookworm-security main contrib

Upgrade PostgreSQL and PostGIS

sudo apt install postgresql-postgis
sudo systemctl stop postgresql
sudo pg_dropcluster 15 main
sudo pg_upgradecluster 13 main
sudo pg_dropcluster 13 main
sudo systemctl start postgresql

Add new packages

sudo apt install python3-email-validator

Clean up

sudo apt purge python3-rdflib-jsonld